Software

Research platforms

Saudi Pathogen Atlas

Interactive genomic-surveillance dashboard for clinical and environmental antimicrobial-resistant bacterial isolates in Saudi Arabia. It integrates lineage, AMR-gene, geographic, temporal, and isolate-level exploration.

GenoPredict

Genome-based clinical-severity prediction platform that uses machine learning and interpretable analysis to translate bacterial genomic features into clinically relevant outcome predictions.

Open-source software

AutoTab — Owner

Framework for machine-learning pipeline optimization for tabular and time-series data. Documentation

easy_mpl — Owner

Utilities for publication-ready scientific visualization with Matplotlib. Documentation

AI4Water — Contributor

A Python framework for data-driven modeling of tabular and time-series environmental data. Documentation

SeqMetrics — Contributor

Unified Python library for regression and classification performance metrics.

AquaFetch — Contributor

Python package for automated acquisition, parsing, and harmonization of water-resource datasets.

If you use any of this software and encounter an issue or have feedback, feel free to email me or open an issue on GitHub.